Publications

2001
R Hershberg, Bejerano, G , Santos-Zavaleta, A , and Margalit, H . 2001. “Promec:: An Updated Database Of Escherichia Coli Mrna Promoters With Experimentally Identified Transcriptional Start Sites”. Nucleic Acids Research, 29, Pp. 277. doi:10.1093/nar/29.1.277.
2000
I Friedberg, Kaplan, T, and Margalit, H . 2000. “Evaluation Of Psi-Blast Alignment Accuracy In Comparison To Structural Alignments”. Protein Science, 9, Pp. 2278-2284. doi:10.1110/ps.9.11.2278.
Y Altuvia and Margalit, H . 2000. “Sequence Signals For Generation Of Antigenic Peptides By The Proteasome: Implications For Proteasomal Cleavage Mechanism”. Journal Of Molecular Biology, 295, Pp. 879-890. doi:10.1006/jmbi.1999.3392.
O Schueler-Furman, Altuvia, Y , Sette, A , and Margalit, H . 2000. “Structure-Based Prediction Of Binding Peptides To Mhc Class I Molecules: Application To A Broad Range Of Mhc Alleles”. Protein Science, 9, Pp. 1838-1846. doi:10.1110/ps.9.9.1838.
1999
D Mishmar, Mandel-Gutfreund, Y , Margalit, H , Rahat, A , and Kerem, B . 1999. “Common Fragile Sites: G-Band Characteristics Within An R-Band”. American Journal Of Human Genetics, 64, Pp. 908-910. doi:10.1086/302299.
1998
O Schueler-Furman, Elber, R , and Margalit, H . 1998. “Knowledge-Based Structure Prediction Of Mhc Class I Bound Peptides: A Study Of 23 Complexes”. Folding & Design, 3, Pp. 549-564. doi:10.1016/S1359-0278(98)00070-4.
D Mishmar, Rahat, A , Scherer, SW , Nyakatura, G , Hinzmann, B , Kohwi, Y , Mandel-Gutfroind, Y , , , Drescher, B , Sas, DE , Margalit, H , Platzer, M , Weiss, A, Tsui, LC , Rosenthal, A , and Kerem, B . 1998. “Molecular Characterization Of A Common Fragile Site (Fra7H) On Human Chromosome 7 By The Cloning Of A Simian Virus 40 Integration Site”. Proceedings Of The National Academy Of Sciences Of The United States Of America, 95, Pp. 8141-8146. doi:10.1073/pnas.95.14.8141.
Y Mandel-Gutfreund and Margalit, H . 1998. “Quantitative Parameters For Amino Acid-Base Interaction: Implications For Prediction Of Protein-Dna Binding Sites”. Nucleic Acids Research, 26, Pp. 2306-2312. doi:10.1093/nar/26.10.2306.
Y Mandel-Gutfreund, Margalit, H , Jernigan, RL , and Zhurkin, VB . 1998. “A Role For Ch•••O Interactions In Protein-Dna Recognition”. Journal Of Molecular Biology, 277, Pp. 1129-1140. doi:10.1006/jmbi.1998.1660.
1997
Y Altuvia, Sette, A , Sidney, J , Southwood, S , and Margalit, H . 1997. “A Structure-Based Algorithm To Predict Potential Binding Peptides To Mhc Molecules With Hydrophobic Binding Pockets”. Human Immunology, 58, Pp. 1-11. doi:10.1016/S0198-8859(97)00210-3.
1996
E Nadir, Margalit, H , Gallily, T , and BenSasson, SA . 1996. “Microsatellite Spreading In The Human Genome: Evolutionary Mechanisms And Structural Implications”. Proceedings Of The National Academy Of Sciences Of The United States Of America, 93, Pp. 6470-6475. doi:10.1073/pnas.93.13.6470.
R Calb, Davidovitch, A , Koby, S , Giladi, H , Goldenberg, D , Margalit, H , Holtel, A , Timmis, K , SanchezRomero, JM , DeLorenzo, V , and Oppenheim, AB . 1996. “Structure And Function Of The Pseudomonas Putida Integration Host Factor”. Journal Of Bacteriology, 178, Pp. 6319-6326. doi:10.1128/jb.178.21.6319-6326.1996.
1995
Y MANDELGUTFREUND, SCHUELER, O , and Margalit, H . 1995. “Comprehensive Analysis Of Hydrogen-Bonds In Regulatory Protein Dna-Complexes - In Search Of Common Principles”. Journal Of Molecular Biology, 253, Pp. 370-382. doi:10.1006/jmbi.1995.0559.
O SCHUELER and Margalit, H . 1995. “Conservation Of Salt Bridges In Protein Families”. Journal Of Molecular Biology, 248, Pp. 125-135. doi:10.1006/jmbi.1995.0206.
YM FRAENKEL, MANDEL, Y , FRIEDBERG, D , and Margalit, H . 1995. “Identification Of Common Motifs In Unaligned Dna-Sequences - Application To Escherichia-Coli Lrp Regulon”. Computer Applications In The Biosciences, 11, Pp. 379-387.
JL CORNETTE, Margalit, H , BERZOFSKY, JA , and DELISI, C . 1995. “Periodic Variation In Side-Chain Polarities Of T-Cell Antigenic Peptides Correlates With Their Structure And Activity”. Proceedings Of The National Academy Of Sciences Of The United States Of America, 92, Pp. 8368-8372. doi:10.1073/pnas.92.18.8368.
Y Altuvia, SCHUELER, O , and Margalit, H . 1995. “Ranking Potential Binding Peptides To Mhc Molecules By A Computational Threading Approach”. Journal Of Molecular Biology, 249, Pp. 244-250. doi:10.1006/jmbi.1995.0293.
1994
H Margalit, Nadir, E , and BenSasson, SA . 1994. “A Complete Alu Element Within The Coding Sequence Of A Central Gene”. Cell, 78, Pp. 173-174. doi:10.1016/0092-8674(94)90287-9.
S LISSER and Margalit, H . 1994. “Determination Of Common Structural Features In Escherichia-Coli Promoters By Computer-Analysis”. European Journal Of Biochemistry, 223, Pp. 823-830. doi:10.1111/j.1432-1033.1994.tb19058.x.
Y Altuvia, BERZOFSKY, JA , ROSENFELD, R , and Margalit, H . 1994. “Sequence Features That Correlate With Mhc Restriction”. Molecular Immunology, 31, Pp. 1-19. doi:10.1016/0161-5890(94)90133-3.