Miri Gitik, Elberg, Gerard , Reichert, Fanny , Tal, Michael , ו Rotshenker, Shlomo . 2023.
“Deletion Of Cd47 From Schwann Cells And Macrophages Hastens Myelin Disruption/Dismantling And Scavenging In Schwann Cells And Augments Myelin Debris Phagocytosis In Macrophages”. J Neuroinflammation, 20, 1, Pp. 243. doi:10.1186/s12974-023-02929-0.
תקציר BACKGROUND: Myelin that surrounds axons breaks in trauma and disease; e.g., peripheral nerve and spinal cord injuries (PNI and SCI) and multiple sclerosis (MS). Resulting myelin debris hinders repair if not effectively scavenged by Schwann cells and macrophages in PNI and by microglia in SCI and MS. We showed previously that myelin debris evades phagocytosis as CD47 on myelin ligates SIRPα (signal regulatory protein-α) on macrophages and microglia, triggering SIRPα to inhibit phagocytosis in phagocytes. Using PNI as a model, we tested the in vivo significance of SIRPα-dependent phagocytosis inhibition in SIRPα null mice, showing that SIRPα deletion leads to accelerated myelin debris clearance, axon regeneration and recovery of function from PNI. Herein, we tested how deletion of CD47, a SIRPα ligand and a cell surface receptor on Schwann cells and phagocytes, affects recovery from PNI.
METHODS: Using CD47 null (CD47-/-) and wild type mice, we studied myelin disruption/dismantling and debris clearance, axon regeneration and recovery of function from PNI.
RESULTS: As expected from CD47 on myelin acting as a SIRPα ligand that normally triggers SIRPα-dependent phagocytosis inhibition in phagocytes, myelin debris clearance, axon regeneration and function recovery were all faster in CD47-/- mice than in wild type mice. Unexpectedly compared with wild type mice, myelin debris clearance started sooner and CD47-deleted Schwann cells displayed enhanced disruption/dismantling and scavenging of myelin in CD47-/- mice. Furthermore, CD47-deleted macrophages from CD47-/- mice phagocytosed more myelin debris than CD47-expressing phagocytes from wild type mice.
CONCLUSIONS: This study reveals two novel normally occurring CD47-dependent mechanisms that impede myelin debris clearance. First, CD47 expressed on Schwann cells inhibits myelin disruption/dismantling and debris scavenging in Schwann cells. Second, CD47 expressed on macrophages inhibits myelin debris phagocytosis in phagocytes. The two add to a third mechanism that we previously documented whereby CD47 on myelin ligates SIRPα on macrophages and microglia, triggering SIRPα-dependent phagocytosis inhibition in phagocytes. Thus, CD47 plays multiple inhibitory roles that combined impede myelin debris clearance, leading to delayed recovery from PNI. Similar inhibitory roles in microglia may hinder recovery from other pathologies in which repair depends on efficient phagocytosis (e.g., SCI and MS).
After a traumatic childhood in Europe during the Second World War, I found that scientific research in Israel was a pleasure beyond my expectations. Over the last 65 year, I have worked on the chemistry and pharmacology of natural products. During the last few decades, most of my research has been on plant cannabinoids, the endogenous cannabinoids arachidonoyl ethanolamide (anandamide) and 2-arachidonoyl glycerol, and endogenous anandamide-like compounds, all of which are involved in a wide spectrum of physiological reactions. Two plant cannabinoids, Δ-tetrahydrocannabinol and cannabidiol, are approved drugs. However, the endogenous cannabinoids and the anandamide-like constituents have not yet been well investigated in humans. For me, intellectual freedom-the ability to do research based on my own scientific interests-has been the most satisfying part of my working life. Looking back over the 91 years of my long life, I conclude that I have been lucky, very lucky, both personally and scientifically.
Philip Larkin’s poem “Aubade” tackles the subject of mortality with technical facility and unsparing candour. It has a reputation for profoundly affecting its readers. Yet poets Seamus Heaney and Czeslaw Milosz think “Aubade” is bad for us and for poetry: it lures us into the underworld and traps us there, and betrays poetry’s purpose by transcribing rather than transforming the depressing facts of reality. Philosophers, however, quite like it. “Aubade” crops up repeatedly in contemporary philosophy of death. I examine the various appeals that philosophers have made to Larkin’s poem with a view to drawing out subtleties in the poem and the philosophical texts, before turning my attention to broader questions of its merit. At first glance, philosophy’s affinity for “Aubade” may seem to confirm Heaney and Milosz’s contention that the poem is somehow against poetry and on the side of “reason, science, and science-inspired philosophy” (Milosz). I argue that the philosophical uses of the poem help to undercut if not entirely dissolve Heaney’s and Milosz’s polarizing efforts; they are mistaken in their views about the different purposes of poetry and philosophy, but there is some philosophical support for their commitment to averting mortal despair.
September 2022: Kathy Behrendt is an Associate Professor of Philosophy at Wilfrid Laurier University, Canada. She received her DPhil. from the University of Oxford, where she also taught for several years. Behrendt has published in the areas of neo-Kantian and Parfitian reductionist theories of personal identity, narrative and anti-narrative views of the self, death, fear of death, illness, literature, and meaning in life. She is co-founder of the International Association for the Philosophy of Death and Dying. Her current research is focused on longevity and change-intolerance, and the limits of our concern for future generations.
In 1894, Jacob Barth proposed that the preformative conjugation in some of the Semitic languages goes back to a – generally bygone – inverse correlation between the thematic vowel of the stem and that of the conjugational prefix.
Evidence for such a distribution is well attested in all branches of Central Semitic, yet it remains disputed whether it should be reconstructed for
Proto-Semitic as well. This paper makes use of new data from a living
Semitic variety, namely the Arabic dialect of Ḥugariyyah in the south of
Yemen, where the pattern observed by Barth is still operative. We examine
the interaction of the conjugational prefixes with the dialectal future tense
marker š(a)-, and point to cases where the inverse correlation is violated.
We outline a sequential development, starting with a phonetically-driven
re-distribution of the preformative vowels, and followed by their reanalysis
as integral to the prefix. We then propose that comparable developments may
have taken place in other Semitic varieties, predominantly Akkadian, and
thus view the Akkadian preformative conjugation as a derivative of a former
inverse correlation, as reconstructed by Barth.
Alessandro Bonadio, Wenig, Bernhard L, Hockla, Alexandra , Radisky, Evette S, ו Shifman, Julia M. 2023.
“Designed Loop Extension Followed By Combinatorial Screening Confers High Specificity To A Broad Matrix Metalloproteinaseinhibitor”. J. Mol. Biol., 435, Pp. 168095.
תקציר Matrix metalloproteinases (MMPs) are key drivers of various diseases, including cancer. Development of probes and drugs capable of selectively inhibiting the individual members of the large MMP family remains a persistent challenge. The inhibitory N-terminal domain of tissue inhibitor of metalloproteinases-2 (N-TIMP2), a natural broad MMP inhibitor, can provide a scaffold for protein engineering to create more selective MMP inhibitors. Here, we pursued a unique approach harnessing both computational design and combinatorial screening to confer high binding specificity toward a target MMP in preference to an anti-target MMP. We designed a loop extension of N-TIMP2 to allow new interactions with the non-conserved MMP surface and generated an efficient focused library for yeast surface display, which was then screened for high binding to the target MMP-14 and low binding to anti-target MMP-3. Deep sequencing analysis identified the most promising variants, which were expressed, purified, and tested for selectivity of inhibition. Our best N-TIMP2 variant exhibited 29 pM binding affinity to MMP-14 and 2.4 µM affinity to MMP-3, revealing 7500-fold greater specificity than WT N-TIMP2. High-confidence structural models were obtained by including NGS data in the AlphaFold multiple sequence alignment. The modeling together with experimental mutagenesis validated our design predictions, demonstrating that the loop extension packs tightly against non-conserved residues on MMP-14 and clashes with MMP-3. This study demonstrates how introduction of loop extensions in a manner guided by target protein conservation data and loop design can offer an attractive strategy to achieve specificity in design of protein ligands.
N. Shalom, Vaknin, Y. , Shaar, R. , Ben-Yosef, E. , Lipschits, O. , Shalev, Y. , Gadot, Y. , ו Boaretto, E.. 2023.
“Destruction By Fire: Reconstructing The Evidence Of The 586 Bce Babylonian Destruction In A Monumental Building In Jerusalem”. Journal Of Archaeological Science, 157, Pp. 105823. doi:https://doi.org/10.1016/j.jas.2023.105823.
Publisher's Version תקציר Evidence of fire is one of the most important features for identifying and characterizing destruction events. Analysis of microscopic remains of fire has developed exceedingly in recent years, enabling archaeologists to examine new questions relating to the intensity of destruction events and to the circumstances of the creation of destruction layers. One of the most crucial events in the history of the Southern Levant is the Babylonian destruction of Judah and its capital Jerusalem in 586 BCE, which shaped the biblical narrative and theology for generations to come. Building 100 was an extraordinarily large and rich elite building, thoroughly destroyed during the Babylonian campaign. This paper presents a study of the destruction layer excavated within the rooms of the building. FTIR spectrometry and archaeomagnetic analysis were combined in the micro-archaeological study of the remains in order to create a detailed reconstruction of the destruction event. This reconstruction sheds new light on how the Babylonian destruction was manifested in reality in the elite buildings of Jerusalem.
Dieses Buch analysiert das Verhältnis zwischen dem jemenitischen König Imam Yaḥyā Ḥamīd al-Dīn und den Juden:Jüdinnen Sanaas aus islamrechtlicher Perspektive. Es beleuchtet sowohl Imam Yahyas Dhimma-Politik als auch die Handlungsmacht von Juden:Jüdinnen als Dhimmis. Es kombiniert erstmals jüdische Erinnerungsliteratur und jemenitische Historiographie aus dem 20. Jhd. mit zum Teil bis heute grundlegenden Texten zaiditischen Rechts (fiqh) aus dem 14.-19. Jhd.
Substantial archaeological exposure of the ancient city of Yehud was achieved through as many as forty-four trial and salvage excavations conducted since 1993. The accumulated data has now reached a critical mass where a broad synthesis is made possible, concerning a site for which investigation has been slow due to the challenges of excavating within a densely populated and rapidly developing modern city. Excavations in the city, located in Israel’s central coastal plain, revealed a patchy history of human settlement, ranging in date between the Late Chalcolithic and Ottoman periods, with lengthy periods of sparse residential use, when the site was variably utilized for funerary, industrial, agricultural, or other types of yet unidentified activities. This comprehensive synthesis unravels the archaeology and history of this little-known site, located at the heart of a region that has undergone major social transformations and historical upheavals during the period in question. The information on Yehud is contextualized with up-to-date knowledge of the archaeology of the central coastal plain, especially concerning Yehud’s hinterland within the Ayalon valley.
Elisheva Rhodes-Mordov, Brandwine-Shemmer, Tal , Zaguri, Rachel , Gutorov, Rita , Peters, Maximilian , ו Minke, Baruch . 2023.
“Diacylglycerol Activates The Light Sensitive Channel Trpl Expressed In Hek Cells”. Int J Mol Sci, 24, 7. doi:10.3390/ijms24076289.
תקציר Physiological activation by light of the TRP and TRP-like (TRPL) channels requires the activation of phospholipase Cβ (PLC). The hydrolysis of phosphatidylinositol 4,5, bisphosphate (PIP) by PLC is a crucial step in the still-unclear light activation, while the generation of Diacylglycerol (DAG) by PLC seems to be involved. In this study, we re-examined the ability of a DAG analogue 1-oleoyl-2-acetyl-sn-glycerol (OAG) to activate the TRPL channels expressed in HEK cells. Unlike previous studies, we added OAG into the cytosol via a patch-clamp pipette and observed robust activation of the expressed TRPL channels. However, TRPL channel activation was much slower than the physiologically activated TRPL by light. Therefore, we used a picosecond-fast optically activated DAG analogue, OptoDArG. Inactive OptoDArG was added into the intracellular solution with the patch-clamp pipette, and it slowly accumulated on the surface membrane of the recorded HEK cell in the dark. A fast application of intense UV light to the recorded cell resulted in a robust and relatively fast TRPL-dependent current that was greatly accelerated by the constitutively active TRPL pore-region mutation. However, this current of the mutant channel was still considerably slower than the native light-induced TRPL current, suggesting that DAG alone is not sufficient for TRPL channel activation under physiological conditions.
Since its publication and first performance, Edward Albee’s Who’s Afraid of Virginia Woolf? (1962) has often been interpreted with regard to the theme of truth and illusion. A less studied but nonetheless important aspect of the play concerns its relation to C. P. Snow’s concept of the “two cultures.” This article argues for the convergence of these two discussions, resulting in an epistemological understanding of Albee. The play not only rejects the mutual alienation of the “two cultures” but also constitutes a dramatic move toward a synthesizing “third culture.” Who’s Afraid of Virginia Woolf? is read as an epistemological drama of ideas.
September 2022: Andreas Tranvik is a PhD candidate in Comparative Literature at the Centre for Languages and Literature, Lund University. His research is primarily focused on literature as it relates to the history of knowledge. Currently, he is working on a research project about humour and knowledge in the works of the 18th century Danish-Norwegian writer Ludvig Holberg.
S Arjmand, Anania, MP , Biagioni, A , Ferrario, M , Galletti, M , Lollo, V , Pellegrini, D , Pompili, R , ו Zigler, A . 2023.
“Different Elements, Same Results: Time-Resolved Temperature Determination By Oxygen And Nitrogen Elements”. Journal Of Instrumentation, 18, Pp. P08003.
Arnon Haran, Bergel, Michael , Kleiman, Doron , Hefetz, Liron , Israeli, Hadar , Weksler-Zangen, Sarah , Agranovich, Bella , Abramovich, Ifat , Ben-Haroush Schyr, Rachel , Gottlieb, Eyal , ו Ben-Zvi, Danny . 2023.
“Differential Effects Of Bariatric Surgery And Caloric Restriction On Hepatic One-Carbon And Fatty Acid Metabolism”. Iscience, 26, 7, Pp. 107046. doi:10.1016/j.isci.2023.107046.
Weight loss interventions, including dietary changes, pharmacotherapy, or bariatric surgery, prevent many of the adverse consequences of obesity, and may also confer intervention-specific benefits beyond those seen with decreased weight alone. We compared the molecular effects of different interventions on liver metabolism to understand the mechanisms underlying these benefits. Male rats on a high-fat, high-sucrose diet underwent sleeve gastrectomy (SG) or intermittent fasting with caloric restriction (IF-CR), achieving equivalent weight loss. The interventions were compared to (AL)-fed controls. Analysis of liver and blood metabolome and transcriptome revealed distinct and sometimes contrasting metabolic effects between the two interventions. SG primarily influenced one-carbon metabolic pathways, whereas IF-CR increased lipogenesis and glycogen storage. These findings suggest that the unique metabolic pathways affected by SG and IF-CR contribute to their distinct clinical benefits, with bariatric surgery potentially influencing long-lasting changes through its effect on one-carbon metabolism.
Introduction: Both the calvarial and the cortical bones develop through intramembranous ossification, yet they have very different structures and functions. The calvaria enables the rapid while protected growth of the brain, whereas the cortical bone takes part in locomotion. Both types of bones undergo extensive modeling during embryonic and post-natal growth, while bone remodeling is the most dominant process in adults. Their shared formation mechanism and their highly distinct functions raise the fundamental question of how similar or diverse the molecular pathways that act in each bone type are. Methods: To answer this question, we aimed to compare the transcriptomes of calvaria and cortices from 21-day old mice by bulk RNA-Seq analysis. Results: The results revealed clear differences in expression levels of genes related to bone pathologies, craniosynostosis, mechanical loading and bone-relevant signaling pathways like WNT and IHH, emphasizing the functional differences between these bones. We further discussed the less expected candidate genes and gene sets in the context of bone. Finally, we compared differences between juvenile and mature bone, highlighting commonalities and dissimilarities of gene expression between calvaria and cortices during post-natal bone growth and adult bone remodeling. Discussion: Altogether, this study revealed significant differences between the transcriptome of calvaria and cortical bones in juvenile female mice, highlighting the most important pathway mediators for the development and function of two different bone types that originate both through intramembranous ossification.
In the course of a seven-year-long project (2014–2021), all published architectural, archaeological, geographical, textual, and epigraphical data pertaining to early Christian churches (n=715) and monasteries (n=306) were collated in a comprehensive digital database. The objectives of the project and the structure of the database are described in detail, including an appendix outlining the templates of each section of the digital corpus (Appendix A). A designated section of the corpus is devoted to preconceived queries, which permit the generation of specific reports pertaining to geographical distribution, architectural components and members, index of terms mentioned in the inscriptions, and more. A Google search function covering the entire database is also available. At present, the database is undergoing the final stages of proofreading. When completed, it will be fully open to the public via the internet.